2024
- E. Baltzi C. Papaloukas D.A. Spandidos, I. Michalopoulos (2024) “Genes encoding γ‑glutamyl‑transpeptidases in the allicin biosynthetic pathway in garlic (Allium sativum)” Biomedical Reports ,
- Papagiannopoulos, O. D., Pezoulas, V. C., Papaloukas, C. & Fotiadis, D. I. (2024) 3D clustering of gene expression data from systemic autoinflammatory diseases using self-organizing maps (Clust3D). Computational and Structural Biotechnology Journal ,
2023
- O. Papagiannopoulos, K. Kourou, C. Papaloukas, ImmunAID Consortium, D.I. Fotiadis (2023) “Classification of Inflammation of Unknown Origin patients based on RNA-seq and SomaScan data” 45th Annual International Conference of the IEEE Engineering in Medicine & Biology Conference (EMBC) ,
- A. Koloi, V. Loukas, A. Sakellarios, J. Bosch, R. Quax, K. Nowakowska, J. Kamierski, C. Papaloukas, D.I. Fotiadis (2023) “A comparison study on creating simulated patient data for individuals suffering from chronic coronary disorders 45th Annual International Conference of the IEEE Engineering in Medicine & Biology Conference (EMBC) ,
- O.D. Papagiannopoulos, C. Papaloukas, D.I. Fotiadis (2023) “Deep Learning for Biomarkers Discovery in Auto-inflammatory Disorders” IEEE EMBS International Conference on Data Science and Engineering in Healthcare ,
2022
- O. Papagiannopoulos, K. Kourou, C. Papaloukas, D.I. Fotiadis (2022) “Comparison of High-Throughput Technologies in the Classification of Adult-Onset Still’s Disease Patients” 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) ,
- V.C. Pezoulas, A. Liontos, E. Mylona, C. Papaloukas, O. Milionis, D. Biros, C. Kyriakopoulos, K. Kostikas, H. Milionis, D.I. Fotiadis (2022) “Predicting the need for mechanical ventilation and mortality in hospitalized COVID-19 patients who received heparin”, 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) ,
- D. Katsarou, E.I. Georga, M. Christou, S. Tigas, C. Papaloukas, D.I. Fotiadis (2022) “Short Term Glucose Prediction in Patients with Type 1 Diabetes Mellitus” 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) ,
- O.D. Papagiannopoulos, C. Papaloukas, V.C. Pezoulas, H.J.G. van de Werken, C. Poulet, Y.M. Mueller, P.D. Katsikis, D. de Seny, D.I. Fotiadis (2022) "Comparison of Proteomic Assay Methods in Autoinflammatory Disease Classification" IEEE-EMBS International Conference on Biomedical and Health Informatics (BHI) ,
- V.C. Pezoulas, E. Mylona, C. Papaloukas, A. Liontos, D.I. Biros, O.I. Milionis, C. Kyriakopoulos, K. Kostikas, H. Milionis, D.I. Fotiadis (2022) "A hybrid approach based on dynamic trajectories to predict mortality in COVID-19 patients upon steroids administration", IEEE-EMBS International Conference on Biomedical and Health Informatics (BHI) ,
- D.N. Katsarou, E.I. Georga, M. Christou, S. Tigas, C. Papaloukas, D.I. Fotiadis (2022) “An Exploratory Study of the Value of Vital Signs on the Short-term Prediction of Subcutaneous Glucose Concentration in Type 1 Diabetes – The GlucoseML Study” 16th EAI International Conference on Pervasive Computing Technologies for Healthcare (PervasiveHealth) ,
- Pezoulas VC, Kourou KD, Mylona E, Papaloukas C, Liontos A, Biros D, Milionis OI, Kyriakopoulos C, Kostikas K, Milionis H, Fotiadis DI. (2022) ICU admission and mortality classifiers for COVID-19 patients based on subgroups of dynamically associated profiles across multiple timepoints Comput Biol Med. [Abstract],
2021
- Pezoulas VC, Papaloukas C, Veyssiere M, Goules A, Tzioufas AG, Soumelis V, Fotiadis DI. (2021) A computational workflow for the detection of candidate diagnostic biomarkers of Kawasaki disease using time-series gene expression data Comput Struct Biotechnol J. [Abstract],
- F. Moazami, A. Lefèvre-Utile, C. Papaloukas, V. Soumelis (2021) "Machine Learning Approaches in Study of Multiple Sclerosis Disease Through Magnetic Resonance Images" Frontiers in Immunology ,
- A. Koloi, A.I. Sakellarios, V.C. Pezoulas, C. Papaloukas, M. Kleber, W. März, D.I. Fotiadis (2021) "Coronary Artery Stenosis Prediction using Machine Learning Algorithms", IEEE-EMBS International Conference on Biomedical and Health Informatics (BHI) ,
- Kourou K, Exarchos KP, Papaloukas C, Sakaloglou P, Exarchos T, Fotiadis DI. (2021) Applied machine learning in cancer research: A systematic review for patient diagnosis, classification and prognosis Comput Struct Biotechnol J. [Abstract],
- Pezoulas VC, Kourou KD, Papaloukas C, Triantafyllia V, Lampropoulou V, Siouti E, Papadaki M, Salagianni M, Koukaki E, Rovina N, Koutsoukou A, Andreakos E, Fotiadis DI. (2021) A Multimodal Approach for the Risk Prediction of Intensive Care and Mortality in Patients with COVID-19 Diagnostics (Basel). [Abstract],
2020
- K. Kourou, V. Pezoulas, E. Georga, Th. Exarchos, C. Papaloukas, M. Voulgarelis, A. Goules, A. Nezos, A.G. Tzioufas, Η.M. Moutsopoulos, C. Mavragani, D.I. Fotiadis (2020) "Predicting Lymphoma Development by Exploiting Genetic Variants and Clinical Findings in a Machine Learning-Based Methodology With Ensemble Classifiers in a Cohort of Sjögren's Syndrome Patients" IEEE-EMBS International Conference on Biomedical and Health Informatics (BHI) ,
- Kourou K, Rigas G, Papaloukas C, Mitsis M, Fotiadis DI. (2020) Cancer classification from time series microarray data through regulatory Dynamic Bayesian Networks Comput Biol Med. [Abstract],
2019
- K. Kourou, C. Papaloukas, D.I. Fotiadis (2019) "Modeling biological data through dynamic bayesian networks for oral squamous cell carcinoma classification" World Congress on Medical Physics and Biomedical Engineering (2018) ,
2017
- Lampros C, Papaloukas C, Exarchos T, Fotiadis DI. (2017) HMMs in Protein Fold Classification Methods Mol Biol. [Abstract],
- Kourou K, Papaloukas C, Fotiadis DI. (2017) Integration of Pathway Knowledge and Dynamic Bayesian Networks for the Prediction of Oral Cancer Recurrence IEEE J Biomed Health Inform. [Abstract],
2015
- Exarchos KP, Kourou K, Exarchos TP, Papaloukas C, Karamouzis MV, Fotiadis DI. (2015) Sequence patterns mediating functions of disordered proteins Adv Exp Med Biol. [Abstract],
2014
- Lampros C, Simos T, Exarchos TP, Exarchos KP, Papaloukas C, Fotiadis DI. (2014) Assessment of optimized Markov models in protein fold classification J Bioinform Comput Biol. [Abstract],
2011
- Exarchos KP, Exarchos TP, Rigas G, Papaloukas C, Fotiadis DI. (2011) Extraction of consensus protein patterns in regions containing non-proline cis peptide bonds and their functional assessment BMC Bioinformatics. [Abstract],
2010
- Karvounis EC, Tsipouras MG, Papaloukas C, Tsalikakis DG, Naka KK, Fotiadis DI. (2010) A non-invasive methodology for fetal monitoring during pregnancy Methods Inf Med. [Abstract],
2009
- Exarchos KP, Exarchos TP, Papaloukas C, Troganis AN, Fotiadis DI. (2009) PBOND: web server for the prediction of proline and non-proline cis/trans isomerization Genomics Proteomics Bioinformatics. [Abstract],
- Lampros C, Papaloukas C, Exarchos K, Fotiadis DI, Tsalikakis D. (2009) Improving the protein fold recognition accuracy of a reduced state-space Hidden Markov model Comput Biol Med. [Abstract],
- Exarchos KP, Exarchos TP, Papaloukas C, Troganis AN, Fotiadis DI. (2009) Detection of discriminative sequence patterns in the neighborhood of proline cis peptide bonds and their functional annotation BMC Bioinformatics. [Abstract],
- Exarchos KP, Papaloukas C, Exarchos TP, Troganis AN, Fotiadis DI. (2009) Prediction of cis/trans isomerization using feature selection and support vector machines J Biomed Inform. [Abstract],
2008
- Exarchos TP, Papaloukas C, Lampros C, Fotiadis DI. (2008) Mining sequential patterns for protein fold recognition J Biomed Inform. [Abstract],
2007
- Exarchos TP, Tsipouras MG, Exarchos CP, Papaloukas C, Fotiadis DI, Michalis LK. (2007) A methodology for the automated creation of fuzzy expert systems for ischaemic and arrhythmic beat classification based on a set of rules obtained by a decision tree Artif Intell Med. [Abstract],
- Katsis CD, Exarchos TP, Papaloukas C, Goletsis Y, Fotiadis DI, Sarmas I. (2007) A two-stage method for MUAP classification based on EMG decomposition Comput Biol Med. [Abstract],
- Lampros C, Costas Papaloukas, Exarchos TP, Yorgos Goletsis, Fotiadis DI. (2007) Sequence-based protein structure prediction using a reduced state-space hidden Markov model Comput Biol Med. [Abstract],
2006
- Exarchos TP, Papaloukas C, Fotiadis DI, Michalis LK. (2006) An association rule mining-based methodology for automated detection of ischemic ECG beats IEEE Trans Biomed Eng. [Abstract],
2002
- Papaloukas C, Fotiadis DI, Likas A, Michalis LK. (2002) An ischemia detection method based on artificial neural networks Artif Intell Med. [Abstract],
2001
- Papaloukas C, Fotiadis DI, Liavas AP, Likas A, Michalis LK. (2001) A knowledge-based technique for automated detection of ischaemic episodes in long duration electrocardiograms Med Biol Eng Comput. [Abstract],
